BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027G12SP1|AL428792
(695 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig973 1207 0.0
>3x_Contig973
Length = 4038
Score = 1207 bits (606), Expect = 0.0
Identities = 682/697 (97%), Gaps = 11/697 (1%)
Strand = Plus / Plus
Query: 6 ttaatgattctgcgtggaccgtggttttcaagtcactagctgtatgcacatctaatgatt 65
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1862 ttaatgattctgcgtggaccgtggttttcaagtcactagctgta-gcacatctaatgatt 1920
Query: 66 cgtgtatggtgataagtgacatagcgttgaagtatttttcaagaaatttggattttttcg 125
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 cgtg-atggtgataag-gacatagcgttgaagtatttttcaagaaatttggattttttcg 1978
Query: 126 agctacgtggcctggcgcgttcgtaccctgcaagatctggtgatgtacaagcgttagata 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1979 agctacgtggcctggcgcgttcgtaccctgcaagatctggtgatgtacaagcgttagata 2038
Query: 186 gatacaggctgtatttgaaagtgagaagcgaggaatacgggaaag-ttcggaaggattac 244
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2039 gatacaggctgtatttgaaagtgagaagcgaggaatacgggaaagcttcggaaggattac 2098
Query: 245 gtgcgcaacagtaatacgaatttwaagaaattcgacgataat-cgttcgtcggaatgttt 303
||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 2099 gtgcgcaacagtaatacgaatttaaagaaattcgacgataatgcgttcgtcggaatgttt 2158
Query: 304 --ggaacatgtgg-aat-ccttggagttgcagattggtgctttgatcaagaataggtact 359
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2159 tgggaacatgtgggaatgccttggagttgcagattggtgctttgatcaagaataggtact 2218
Query: 360 cgcaatgcgat-ttaaacaacgatttaattatgttcgcattcaagatgcttgtacaggac 418
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2219 cgcaatgcgatgttaaacaacgatttaattatgttcgcattcaagatgcttgtacaggac 2278
Query: 419 ttgttagccttgtacaatgcgttgaatgaaggtatcatcactctattggratctttcttc 478
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2279 ttgttagccttgtacaatgcgttgaatgaaggtatcatcactctattggaatctttcttc 2338
Query: 479 gaattaactcgttccaatgctgaacgtacgcttaaattatacaagcaggtttgttcaatt 538
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2339 gaattaactcgttccaatgctgaacgtacgcttaaattatacaag-aggtttgttcaatt 2397
Query: 539 gaccgaaaatgtggtacgttatctaawatcagctaaggccgttggattgaagattccagt 598
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2398 gaccgaaaatgtggtacgttatctaaaatcagctaaggccgttggattgaagattccagt 2457
Query: 599 cattaaacatattaccactaaattgatcaatttgttagaagatcatttacgtgaagatac 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2458 cattaaacatattaccactaaattgatcaatttgttagaagatcatttacgtgaagatac 2517
Query: 659 tgaaaataaaggtaacactttctcgaaggatkatcaa 695
||||||||||||||||||||||||||||||| |||||
Sbjct: 2518 tgaaaataaaggtaacactttctcgaaggatgatcaa 2554
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4657
Number of Sequences: 1807
Number of extensions: 4657
Number of successful extensions: 127
Number of sequences better than 1.0e-20: 1
length of query: 695
length of database: 10,358,551
effective HSP length: 16
effective length of query: 679
effective length of database: 10,329,639
effective search space: 7013824881
effective search space used: 7013824881
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)